NETI (Network Inference)

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E. coli repressilator
MAPK cascade
Yeast glycolysis
Experimental data

Experimental data: Yeast (Saccharomyces cerevisiae) cell cycle microarray time series data set

Spellman PT, Sherlock G, Zhang MQ, Iyer VR, Anders K, Eisen MB, Brown PO, Botstein D, Futcher B: Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization. Mol. Biol. Cell, 1998, 9:3273-3297.
16-gene sub-network in G1 and S phase used for inference
For complete network visit KEGGs Cell cycle-yeast-Saccharomyces cerevisiae page
This data set consists of three sub-sets measured using different cells synchronization methods:
alpha factor-based cells synchronization method
(selected time series for the 16-gene sub-network)
size-based cells synchronization method
(selected time series for the 16-gene sub-network)
cdc15-based cells synchronization method
(selected time series for the 16-gene sub-network)
Contact : eugene.novikov@curie.fr | Bioinformatics Home Page : http://bioinfo.curie.fr | Institut Curie Home Page : http://www.curie.fr