distrib.plot {EMA}R Documentation

Distribution plots of genes expression level

Description

Plot the distribution of the expression level of each gene of interest.

Usage

distrib.plot(data, labels = NULL, plot = TRUE, ...)

Arguments

data

Expression matrix, genes on rows and samples on columns

labels

A character string or numeric vector of label

plot

If true, plots are displayed

...

Arguments to be passed to methods, such as graphical parameters (see 'par').

Details

For each gene (row of the matrix), the distribution of the expression level for all the samples is ploted. The colors are chosen according to the label information.

Value

A list of objects of class 'histogram':

mids

The n cell midpoints

counts

n integers; for each cell, the number of 'x[]' inside.

Author(s)

EMA group

See Also

hist

Examples


data(marty)

distrib.plot(marty[1:5,], labels=marty.type.cl)

[Package EMA version 1.3.2 Index]